How to Make The Best Overnight Oats For Gut Health

A glass jar of gut-friendly overnight oats layered with yogurt, fresh blueberries, sliced strawberries, almonds, and a sprig of mint, with a spoon inside.

Summary

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Mornings move fast, especially with kids. A solid breakfast can help you feel more grounded and give your body the fuel it needs to take on the day.

Overnight oats check all the boxes. Made by soaking rolled oats in milk or yogurt overnight, they’re a cold, ready-to-eat breakfast that’s both practical and popular. Plus, you can make it your own with your favorite ingredients. 

With a quick prep the night before, you have a tasty breakfast that supports your gut with prebiotics and probiotics. 

Before we jump into the recipe, here’s a quick look at how these ingredients work together to boost your gut health.

Why your gut loves overnight oats

Oats are rich in beta-glucan, a type of soluble fiber that feeds beneficial gut bacteria [1]. As it ferments in the colon, it produces short-chain fatty acids like butyrate, which help support the gut lining and reduce inflammation [2]. Adding oat bran—the outer layer of the oat grain—takes this up a notch. It’s especially high in beta-glucans and may help boost butyrate production even more.

Also, oats naturally contain resistant starch, especially when raw. Soaking them overnight instead of cooking helps preserve more of it, supporting gut health and blood sugar balance [3].

Most Americans miss out on fiber, with about 94% falling short of the USDA’s recommended 28–34 grams daily [4]. One serving of these overnight oats, packed with rolled oats, chia seeds, and fruit, delivers around 7–10 grams of fiber to fuel your gut.

Oats also have a low glycemic index, releasing energy slowly and helping to steady blood sugar and insulin, which may benefit your microbiome and help you stay full longer [3].

When you include yogurt with live cultures in your overnight oats, it adds helpful bacteria and promotes microbial diversity. It also contributes protein, B vitamins, and minerals like calcium and phosphorus. A spoonful of kefir or cultured cream also provides beneficial bacteria. 

Toppings that boost nutritional value

A close-up bowl of mixed berries including sliced strawberries, raspberries, blueberries, and blackberries, served in a patterned dish.
  • Fresh or frozen fruit: Berries (blueberries, cherries, or plums), kiwi, apricots, or grated apple or pear with the skin on for a pectin boost. Berries are also rich in polyphenols, which support beneficial gut bacteria. Frozen berries or cherries work well if mixed in the night before.
  • Seeds and nuts: Chia seeds provide prebiotic fiber, plant-based omega-3 fatty acids, and a little texture to help keep digestion moving for overall gut balance. Hemp seeds add extra plant-based protein. Flax meal, pumpkin seeds, and chopped walnuts add fiber, healthy fats, and micronutrients that support gut and heart health.
  • Flavor add-ins: Nut butter, citrus zest, or cacao nibs also bring polyphenols, healthy fats, and minerals that can support overall health.

Gut healthy overnight oats recipe

Serves: 4

Plant count: 6+
Prep time: 5-10 minutes
Refrigerate: At least 6 hours, or overnight

Ingredients

  • 2 cups rolled oats (not quick or steel-cut)
  • ¼ cup oat bran
  • 1½ cups milk (dairy or unsweetened plant-based)
  • 1–2 cups fresh or frozen berries 
  • 1 cup unsweetened yogurt with live cultures 
  • 1 tablespoon chia seeds 
  • 1–2 tablespoons hemp seeds 
  • 2–3 tablespoons maple syrup or honey
  • ¼ teaspoon cinnamon
  • A small pinch of salt

Directions

  1. Mix everything in a large bowl or jar.
  2. Stir well.
  3. Cover and refrigerate for at least 4 hours.
  4. Stir again before serving. Add toppings if you’d like.

Add crunchy toppings right before eating so they keep their texture. Excess sugar can feed less beneficial microbes and disrupt gut balance over time, so try to limit high-sugar add-ins, like chocolate chips and sweetened dried fruit.

How long are overnight oats good for? It will stay fresh in the fridge for a few days. You can also prep them in Mason jars for a grab-and-go option. 

You don’t have to make it a full meal; overnight oats can also be spooned over yogurt or blended into a smoothie for extra creaminess, fiber, and lasting fullness.

Keep your mornings simple and gut-friendly

A nourishing breakfast can set the tone for your whole day. And when it includes ingredients that support digestion and microbial balance, even better.

Everyone’s gut is different, though, and knowing what yours needs can help you make the most of healthy routines. A Gut Health Test gives you insight into your microbiome and offers personalized food recommendations. So you can keep doing what works, and fine-tune what doesn’t.

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References

  1. G. A. Fabiano, L. M. Shinn, and A. E. C. Antunes, "Relationship between oat consumption, gut microbiota modulation, and short-chain fatty acid synthesis: An integrative review," Nutrients, vol. 15, no. 16, p. 3534, Aug. 2023, doi: 10.3390/nu15163534.
  2. K. Hodgkinson et al., “Butyrate’s role in human health and the current progress towards its clinical application to treat gastrointestinal disease,” Clin. Nutr., vol. 42, no. 2, pp. 61–75, Feb. 2023, doi: 10.1016/j.clnu.2022.10.024.
  3. Z. Chen et al., “Resistant starch and the gut microbiome: Exploring beneficial interactions and dietary impacts,” Food Chem. X, vol. 21, no. 101118, p. 101118, Mar. 2024, doi: 10.1016/j.fochx.2024.101118.
  4. 2025 Dietary Guidelines Advisory Committee, Scientific Report of the 2025 Dietary Guidelines Advisory Committee: Advisory Report to the Secretary of Health and Human Services and Secretary of Agriculture, U.S. Department of Health and Human Services, 2024.